BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G03LP1|AL425580
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig134 1084 0.0
3x_Contig197 361 1e-99
>3x_Contig134
Length = 1400
Score = 1084 bits (546), Expect = 0.0
Identities = 600/611 (98%), Gaps = 7/611 (1%)
Strand = Plus / Plus
Query: 1 agcgaactttccacttctacaagattcctacgaaaaggttactttcaaaaccttgttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agcgaactttccacttctacaagattcctacgaaaaggttactttcaaaaccttgttaaa 854
Query: 61 ggccacgactattactagtcaaggaaagagccatcaagtacaccgattggaaaaagatac 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 855 ggccacg-ctattactagtcaaggaaagagccatcaagtacaccgattggaaaaag-tac 912
Query: 121 aatagatattgaaaatgctatttattacgctctctttggaaaagaatatcaaagctgaac 180
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 aat-gat-ttgaaaatgctatttattacgctctctttggaaaagaatatcaaagctgaac 970
Query: 181 ctctcatggactcttcggctctatctgattgtaaggattggaaargggtcattagatctt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 971 ctctcatggactcttcggctctatctgattgtaaggattggaaaggggtcattagatctt 1030
Query: 241 ataacggaactgattttgatgaattgaaagtaaatgcaaataatcttcttcactttttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ataacggaactgattttgatgaattgaaagtaaatgcaaataatcttcttcactttttgg 1090
Query: 301 cattagatattggctctttctcgctgctgcattttgaacaattgtaaaattgacaatgat 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 catt-gatattggctctttctcgctgctgcattttgaacaattgtaaaattgacaatgat 1149
Query: 361 gttttggcgaagagcttagaggacttcaaacatcaagctcttaatattgtacgcacaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 gttttggcgaagagcttagaggacttcaaacatcaagctcttaatattgtacgcacaatg 1209
Query: 421 aaccccgagattatatcaatgtcagactgtttggattcatcaatcacatatacccaattt 480
|||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 aaccccgaga--ataaaaaagtcagactgtttggattcatcaatcacatatacccaattt 1267
Query: 481 tccatggccgttaatgatgttgcccctaatcttttaaatcccttgaaaatgctaatggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 tccatggccgttaatgatgttgcccctaatcttttaaatcccttgaaaatgctaatggaa 1327
Query: 541 catgttctttatatggatagagatctcgtagacgcggacgttcttcaaccaatctcaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 catgttctttatatggatagagatctcgtagacgcggacgttcttcaaccaatctcaaat 1387
Query: 601 cctactaaaat 611
|||||||||||
Sbjct: 1388 cctactaaaat 1398
>3x_Contig197
Length = 1712
Score = 361 bits (182), Expect = 1e-99
Identities = 222/230 (96%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 782 aattcgtgacgaggacgatgaagatggcgatgcttatgccgtgaaaaatccaaggtatag 841
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 aattcgtgacgaggacgatgaagatggcgatccttatgccgtgaaaaatccaaggtatag 69
Query: 842 aaactttctgcaagaatatggtaagttaaaaagtgaagatcaacatttggatacgttaag 901
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aaaccttctgcaagaacatggtaagttaaaaagtgaagatcaacatttggatacgttaag 129
Query: 902 taag-aaaaacgaaaattgttatttgctgtttgtattcgcgacccatgggaagtatcaaa 960
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 130 taagaaaaaacgaaaattgttatttgctgtttgtattcgcgacccatggaaagtatcaaa 189
Query: 961 taaagatttgtttg-gtgattcgtctac-aaaattatcc-acttcatcca 1007
|||||||||||||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 190 taaagatttgtttgcgtgattcgtctacaaaaattatccaacttcatcca 239
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9042
Number of Sequences: 1807
Number of extensions: 9042
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 2
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)